WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28D1.7a.1 Sequence Name  F28D1.7a.1
Length (nt)  482   Chromosome Location  IV: 12390298-12391053
Chromosome . Primary Identifier  IV Chromosome Location . Start  12390298
Chromosome Location . End  12391053 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28D1.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004492 rps-23 F28D1.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28D1.7a F28D1.7a 432   IV: 12390343-12390489

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F28D1.7a.1 12390298 12391053 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147246   192   IV: 12390298-12390489 Caenorhabditis elegans
Exon147249   121   IV: 12390687-12390807 Caenorhabditis elegans
Exon147251   169   IV: 12390885-12391053 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F28D1.7a.1 12390298 12391053 -1

1 Sequence

Length
482

1 Sequence Ontology Term

Identifier Name Description
transcript