WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28D1.9.1 Sequence Name  F28D1.9.1
Length (nt)  2479   Chromosome Location  IV: 12392121-12398706
Chromosome . Primary Identifier  IV Chromosome Location . Start  12392121
Chromosome Location . End  12398706 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28D1.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009218 acs-20 F28D1.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28D1.9 F28D1.9 2055   IV: 12392481-12392635

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F28D1.9.1 12392121 12398706 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147255   515   IV: 12392121-12392635 Caenorhabditis elegans
Exon147256   615   IV: 12393530-12394144 Caenorhabditis elegans
Exon147257   117   IV: 12394336-12394452 Caenorhabditis elegans
Exon147258   345   IV: 12394509-12394853 Caenorhabditis elegans
Exon147259   162   IV: 12394902-12395063 Caenorhabditis elegans
Exon147260   199   IV: 12395114-12395312 Caenorhabditis elegans
Exon147261   100   IV: 12395582-12395681 Caenorhabditis elegans
Exon147262   96   IV: 12395726-12395821 Caenorhabditis elegans
Exon147263   177   IV: 12396602-12396778 Caenorhabditis elegans
Exon147264   153   IV: 12398554-12398706 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F28D1.9.1 12392121 12398706 -1

1 Sequence

Length
2479

1 Sequence Ontology Term

Identifier Name Description
transcript