WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08G5.1a.1 Sequence Name  F08G5.1a.1
Length (nt)  1296   Chromosome Location  IV: 12408925-12410470
Chromosome . Primary Identifier  IV Chromosome Location . Start  12408925
Chromosome Location . End  12410470 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08G5.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008580 dsb-1 F08G5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08G5.1a F08G5.1a 1158   IV: 12408935-12409012

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08G5.1a.1 12408925 12410470 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147281   88   IV: 12408925-12409012 Caenorhabditis elegans
Exon147282   119   IV: 12409058-12409176 Caenorhabditis elegans
Exon147284   167   IV: 12409226-12409392 Caenorhabditis elegans
Exon147287   383   IV: 12409441-12409823 Caenorhabditis elegans
Exon147290   318   IV: 12409874-12410191 Caenorhabditis elegans
Exon147294   221   IV: 12410250-12410470 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08G5.1a.1 12408925 12410470 1

1 Sequence

Length
1296

1 Sequence Ontology Term

Identifier Name Description
transcript