WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08G5.1b.1 Sequence Name  F08G5.1b.1
Length (nt)  1059   Chromosome Location  IV: 12409079-12410342
Chromosome . Primary Identifier  IV Chromosome Location . Start  12409079
Chromosome Location . End  12410342 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08G5.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008580 dsb-1 F08G5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08G5.1b F08G5.1b 1059   IV: 12409079-12409176

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08G5.1b.1 12409079 12410342 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147283   98   IV: 12409079-12409176 Caenorhabditis elegans
Exon147285   167   IV: 12409226-12409392 Caenorhabditis elegans
Exon147288   383   IV: 12409441-12409823 Caenorhabditis elegans
Exon147291   318   IV: 12409874-12410191 Caenorhabditis elegans
Exon147293   93   IV: 12410250-12410342 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08G5.1b.1 12409079 12410342 1

1 Sequence

Length
1059

1 Sequence Ontology Term

Identifier Name Description
transcript