WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:F08G5.5b Sequence Name  F08G5.5b
Length (nt)  1402   Chromosome Location  IV: 12425229-12432511
Chromosome . Primary Identifier  IV Chromosome Location . Start  12425229
Chromosome Location . End  12432511 Method  non_coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This NcPrimaryTranscript isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08G5.5b

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008583 ugt-65 F08G5.5 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F08G5.5b 12425229 12432511 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147338   140   IV: 12425229-12425368 Caenorhabditis elegans
Exon147346   233   IV: 12426891-12427123 Caenorhabditis elegans
Exon147350   135   IV: 12427364-12427498 Caenorhabditis elegans
Exon147358   61   IV: 12429884-12429944 Caenorhabditis elegans
Exon147362   91   IV: 12429990-12430080 Caenorhabditis elegans
Exon147363   241   IV: 12430941-12431181 Caenorhabditis elegans
Exon147370   303   IV: 12431604-12431906 Caenorhabditis elegans
Exon147371   198   IV: 12432314-12432511 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F08G5.5b 12425229 12432511 1

1 Sequence

Length
1402

1 Sequence Ontology Term

Identifier Name Description
transcript