WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08G5.7.1 Sequence Name  F08G5.7.1
Length (nt)  1275   Chromosome Location  IV: 12432640-12435035
Chromosome . Primary Identifier  IV Chromosome Location . Start  12432640
Chromosome Location . End  12435035 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08G5.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00023502 clec-184 F08G5.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08G5.7 F08G5.7 1230   IV: 12432651-12432705

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08G5.7.1 12432640 12435035 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147376   66   IV: 12432640-12432705 Caenorhabditis elegans
Exon147377   54   IV: 12432751-12432804 Caenorhabditis elegans
Exon147378   155   IV: 12433256-12433410 Caenorhabditis elegans
Exon147379   156   IV: 12433479-12433634 Caenorhabditis elegans
Exon147380   492   IV: 12433684-12434175 Caenorhabditis elegans
Exon147381   97   IV: 12434222-12434318 Caenorhabditis elegans
Exon147382   255   IV: 12434781-12435035 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08G5.7.1 12432640 12435035 1

1 Sequence

Length
1275

1 Sequence Ontology Term

Identifier Name Description
transcript