WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25G4.5.1 Sequence Name  C25G4.5.1
Length (nt)  4238   Chromosome Location  IV: 12445801-12451335
Chromosome . Primary Identifier  IV Chromosome Location . Start  12445801
Chromosome Location . End  12451335 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25G4.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001085 dpy-26 C25G4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25G4.5 C25G4.5 3792   IV: 12446202-12446504

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C25G4.5.1 12445801 12451335 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147407   704   IV: 12445801-12446504 Caenorhabditis elegans
Exon147408   516   IV: 12446557-12447072 Caenorhabditis elegans
Exon147409   105   IV: 12447121-12447225 Caenorhabditis elegans
Exon147410   69   IV: 12447275-12447343 Caenorhabditis elegans
Exon147411   94   IV: 12447832-12447925 Caenorhabditis elegans
Exon147412   618   IV: 12447971-12448588 Caenorhabditis elegans
Exon147413   722   IV: 12449047-12449768 Caenorhabditis elegans
Exon147414   980   IV: 12449822-12450801 Caenorhabditis elegans
Exon147415   343   IV: 12450857-12451199 Caenorhabditis elegans
Exon147416   87   IV: 12451249-12451335 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C25G4.5.1 12445801 12451335 -1

1 Sequence

Length
4238

1 Sequence Ontology Term

Identifier Name Description
transcript