WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T04A11.5.1 Sequence Name  T04A11.5.1
Length (nt)  951   Chromosome Location  IV: 12484910-12486537
Chromosome . Primary Identifier  IV Chromosome Location . Start  12484910
Chromosome Location . End  12486537 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04A11.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011420 T04A11.5 T04A11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T04A11.5 T04A11.5 951   IV: 12484910-12485017

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T04A11.5.1 12484910 12486537 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147512   108   IV: 12484910-12485017 Caenorhabditis elegans
Exon147513   345   IV: 12485064-12485408 Caenorhabditis elegans
Exon147514   54   IV: 12485871-12485924 Caenorhabditis elegans
Exon147515   354   IV: 12485978-12486331 Caenorhabditis elegans
Exon147516   90   IV: 12486448-12486537 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T04A11.5.1 12484910 12486537 -1

1 Sequence

Length
951

1 Sequence Ontology Term

Identifier Name Description
transcript