WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T04A11.12b.1 Sequence Name  T04A11.12b.1
Length (nt)  984   Chromosome Location  IV: 12487579-12489721
Chromosome . Primary Identifier  IV Chromosome Location . Start  12487579
Chromosome Location . End  12489721 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04A11.12b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005689 sru-26 T04A11.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T04A11.12b T04A11.12b 984   IV: 12487579-12487818

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T04A11.12b.1 12487579 12489721 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147518   240   IV: 12487579-12487818 Caenorhabditis elegans
Exon147520   210   IV: 12488275-12488484 Caenorhabditis elegans
Exon147522   159   IV: 12488529-12488687 Caenorhabditis elegans
Exon147524   210   IV: 12488935-12489144 Caenorhabditis elegans
Exon147525   165   IV: 12489557-12489721 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T04A11.12b.1 12487579 12489721 1

1 Sequence

Length
984

1 Sequence Ontology Term

Identifier Name Description
transcript