WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T04A11.7a Sequence Name  T04A11.7a
Length (nt)  1053   Chromosome Location  IV: 12496208-12496450
Chromosome . Primary Identifier  IV Chromosome Location . Start  12496208
Chromosome Location . End  12496450
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04A11.7a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE52311 SRU-20, isoform a 40.7 350 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00035112
WBRNAi00052320
WBRNAi00018101

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T04A11.7a 12496208 12496450 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005683 sru-20 T04A11.7 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:T04A11.7a 12496208 12496450 1
CDS:T04A11.7a 12496876 12497085 1
CDS:T04A11.7a 12497131 12497289 1
CDS:T04A11.7a 12497332 12497444 1
CDS:T04A11.7a 12497517 12497844 1

1 Sequence

Length
1053

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T04A11.7a.1 T04A11.7a.1 1844   IV: 12495496-12497923