WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08E7.3.1 Sequence Name  K08E7.3.1
Length (nt)  2286   Chromosome Location  IV: 12567842-12570622
Chromosome . Primary Identifier  IV Chromosome Location . Start  12567842
Chromosome Location . End  12570622 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08E7.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002368 let-99 K08E7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08E7.3 K08E7.3 2097   IV: 12567856-12567900

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08E7.3.1 12567842 12570622 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147671   59   IV: 12567842-12567900 Caenorhabditis elegans
Exon147672   353   IV: 12567951-12568303 Caenorhabditis elegans
Exon147673   1190   IV: 12568351-12569540 Caenorhabditis elegans
Exon147674   185   IV: 12569599-12569783 Caenorhabditis elegans
Exon147675   499   IV: 12570124-12570622 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08E7.3.1 12567842 12570622 1

1 Sequence

Length
2286

1 Sequence Ontology Term

Identifier Name Description
transcript