WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08E7.5d.1 Sequence Name  K08E7.5d.1
Length (nt)  1881   Chromosome Location  IV: 12573372-12578871
Chromosome . Primary Identifier  IV Chromosome Location . Start  12573372
Chromosome Location . End  12578871 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08E7.5d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010673 K08E7.5 K08E7.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08E7.5d K08E7.5d 1749   IV: 12573381-12573579

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08E7.5d.1 12573372 12578871 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147738   208   IV: 12573372-12573579 Caenorhabditis elegans
Exon147742   231   IV: 12573763-12573993 Caenorhabditis elegans
Exon147749   58   IV: 12576486-12576543 Caenorhabditis elegans
Exon147752   86   IV: 12576754-12576839 Caenorhabditis elegans
Exon147757   101   IV: 12576902-12577002 Caenorhabditis elegans
Exon147762   81   IV: 12577062-12577142 Caenorhabditis elegans
Exon147767   49   IV: 12577186-12577234 Caenorhabditis elegans
Exon147772   91   IV: 12577316-12577406 Caenorhabditis elegans
Exon147777   125   IV: 12577450-12577574 Caenorhabditis elegans
Exon147782   311   IV: 12577628-12577938 Caenorhabditis elegans
Exon147787   135   IV: 12577987-12578121 Caenorhabditis elegans
Exon147792   138   IV: 12578169-12578306 Caenorhabditis elegans
Exon147797   98   IV: 12578552-12578649 Caenorhabditis elegans
Exon147802   169   IV: 12578703-12578871 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08E7.5d.1 12573372 12578871 1

1 Sequence

Length
1881

1 Sequence Ontology Term

Identifier Name Description
transcript