WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08E7.8a.1 Sequence Name  K08E7.8a.1
Length (nt)  564   Chromosome Location  IV: 12585190-12586066
Chromosome . Primary Identifier  IV Chromosome Location . Start  12585190
Chromosome Location . End  12586066 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08E7.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010675 K08E7.8 K08E7.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08E7.8a K08E7.8a 531   IV: 12585223-12585359

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08E7.8a.1 12585190 12586066 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147754   170   IV: 12585190-12585359 Caenorhabditis elegans
Exon147756   168   IV: 12585402-12585569 Caenorhabditis elegans
Exon147758   70   IV: 12585616-12585685 Caenorhabditis elegans
Exon147761   74   IV: 12585728-12585801 Caenorhabditis elegans
Exon147762   82   IV: 12585985-12586066 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08E7.8a.1 12585190 12586066 -1

1 Sequence

Length
564

1 Sequence Ontology Term

Identifier Name Description
transcript