WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K08E7.9 Sequence Name  K08E7.9
Length (nt)  3966   Chromosome Location  IV: 12591828-12591904
Chromosome . Primary Identifier  IV Chromosome Location . Start  12591828
Chromosome Location . End  12591904
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08E7.9

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE11932 PGP-1 145.0 1321 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00085169
WBRNAi00050311
WBRNAi00070104
WBRNAi00085175
WBRNAi00016820
WBRNAi00085165
WBRNAi00091137

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K08E7.9 12591828 12591904 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003995 pgp-1 K08E7.9 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:K08E7.9 12591828 12591904 -1
CDS:K08E7.9 12591957 12592310 -1
CDS:K08E7.9 12592361 12592682 -1
CDS:K08E7.9 12592732 12592993 -1
CDS:K08E7.9 12593150 12593819 -1
CDS:K08E7.9 12593918 12594205 -1
CDS:K08E7.9 12594852 12595305 -1
CDS:K08E7.9 12595586 12595939 -1
CDS:K08E7.9 12596062 12596175 -1
CDS:K08E7.9 12596244 12596712 -1
CDS:K08E7.9 12596786 12597032 -1
CDS:K08E7.9 12597166 12597325 -1
CDS:K08E7.9 12598188 12598272 -1
CDS:K08E7.9 12599058 12599167 -1

1 Sequence

Length
3966

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K08E7.9.1 K08E7.9.1 4092   IV: 12591704-12599169