WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y55D9A.1b Sequence Name  Y55D9A.1b
Length (nt)  2457   Chromosome Location  IV: 12606104-12606289
Chromosome . Primary Identifier  IV Chromosome Location . Start  12606104
Chromosome Location . End  12606289
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55D9A.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29066 EFA-6, isoform b 90.6 818 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00000921
WBRNAi00057517
WBRNAi00021023
WBRNAi00098432
WBRNAi00065625

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y55D9A.1b 12606104 12606289 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013223 efa-6 Y55D9A.1 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y55D9A.1b 12606104 12606289 -1
CDS:Y55D9A.1b 12606959 12607464 -1
CDS:Y55D9A.1b 12609868 12610400 -1
CDS:Y55D9A.1b 12610454 12610637 -1
CDS:Y55D9A.1b 12610756 12610990 -1
CDS:Y55D9A.1b 12611295 12611416 -1
CDS:Y55D9A.1b 12611800 12611952 -1
CDS:Y55D9A.1b 12613390 12613629 -1
CDS:Y55D9A.1b 12614050 12614197 -1
CDS:Y55D9A.1b 12614570 12614719 -1

1 Sequence

Length
2457

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y55D9A.1b.1 Y55D9A.1b.1 2871   IV: 12605695-12614724