WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C01C7.1a.1 Sequence Name  C01C7.1a.1
Length (nt)  3580   Chromosome Location  IV: 12622091-12631022
Chromosome . Primary Identifier  IV Chromosome Location . Start  12622091
Chromosome Location . End  12631022 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01C7.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000186 ark-1 C01C7.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01C7.1a C01C7.1a 3132   IV: 12622483-12622537

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C01C7.1a.1 12622091 12631022 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147847   447   IV: 12622091-12622537 Caenorhabditis elegans
Exon147849   245   IV: 12622580-12622824 Caenorhabditis elegans
Exon147851   222   IV: 12623085-12623306 Caenorhabditis elegans
Exon147853   472   IV: 12623656-12624127 Caenorhabditis elegans
Exon147855   533   IV: 12624916-12625448 Caenorhabditis elegans
Exon147857   370   IV: 12626352-12626721 Caenorhabditis elegans
Exon147859   344   IV: 12627509-12627852 Caenorhabditis elegans
Exon147861   321   IV: 12628359-12628679 Caenorhabditis elegans
Exon147863   235   IV: 12629240-12629474 Caenorhabditis elegans
Exon147865   175   IV: 12630094-12630268 Caenorhabditis elegans
Exon147867   86   IV: 12630695-12630780 Caenorhabditis elegans
Exon147869   130   IV: 12630893-12631022 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C01C7.1a.1 12622091 12631022 -1

1 Sequence

Length
3580

1 Sequence Ontology Term

Identifier Name Description
transcript