WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C01C7.1b Sequence Name  C01C7.1b
Length (nt)  3120   Chromosome Location  IV: 12622483-12622525
Chromosome . Primary Identifier  IV Chromosome Location . Start  12622483
Chromosome Location . End  12622525
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01C7.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE43742 ARK-1, isoform b 114.9 1039 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00039297
WBRNAi00085932
WBRNAi00085934
WBRNAi00085933
WBRNAi00085936
WBRNAi00085935
WBRNAi00092169

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C01C7.1b 12622483 12622525 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000186 ark-1 C01C7.1 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:C01C7.1b 12622483 12622525 -1
CDS:C01C7.1b 12622580 12622824 -1
CDS:C01C7.1b 12623085 12623306 -1
CDS:C01C7.1b 12623656 12624127 -1
CDS:C01C7.1b 12624916 12625448 -1
CDS:C01C7.1b 12626352 12626721 -1
CDS:C01C7.1b 12627509 12627852 -1
CDS:C01C7.1b 12628359 12628679 -1
CDS:C01C7.1b 12629240 12629474 -1
CDS:C01C7.1b 12630094 12630268 -1
CDS:C01C7.1b 12630695 12630780 -1
CDS:C01C7.1b 12630893 12630966 -1

1 Sequence

Length
3120

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C01C7.1b.1 C01C7.1b.1 3566   IV: 12622093-12631022