WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C26H9A.1b.1 Sequence Name  C26H9A.1b.1
Length (nt)  3853   Chromosome Location  IV: 12640462-12650652
Chromosome . Primary Identifier  IV Chromosome Location . Start  12640462
Chromosome Location . End  12650652 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C26H9A.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006916 vha-7 C26H9A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C26H9A.1b C26H9A.1b 3633   IV: 12640462-12640610

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C26H9A.1b.1 12640462 12650652 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

25 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147873   149   IV: 12640462-12640610 Caenorhabditis elegans
Exon147875   171   IV: 12640661-12640831 Caenorhabditis elegans
Exon147877   37   IV: 12640885-12640921 Caenorhabditis elegans
Exon147879   94   IV: 12642531-12642624 Caenorhabditis elegans
Exon147881   175   IV: 12642680-12642854 Caenorhabditis elegans
Exon147883   355   IV: 12643141-12643495 Caenorhabditis elegans
Exon147887   315   IV: 12643549-12643863 Caenorhabditis elegans
Exon147889   57   IV: 12644264-12644320 Caenorhabditis elegans
Exon147891   92   IV: 12644374-12644465 Caenorhabditis elegans
Exon147893   127   IV: 12644672-12644798 Caenorhabditis elegans
Exon147895   83   IV: 12644845-12644927 Caenorhabditis elegans
Exon147897   127   IV: 12644979-12645105 Caenorhabditis elegans
Exon147899   90   IV: 12645164-12645253 Caenorhabditis elegans
Exon147901   87   IV: 12645301-12645387 Caenorhabditis elegans
Exon147903   151   IV: 12645898-12646048 Caenorhabditis elegans
Exon147905   140   IV: 12646506-12646645 Caenorhabditis elegans
Exon147907   137   IV: 12646687-12646823 Caenorhabditis elegans
Exon147909   94   IV: 12646871-12646964 Caenorhabditis elegans
Exon147911   146   IV: 12647340-12647485 Caenorhabditis elegans
Exon147913   152   IV: 12648071-12648222 Caenorhabditis elegans
Exon147915   134   IV: 12648271-12648404 Caenorhabditis elegans
Exon147917   201   IV: 12648589-12648789 Caenorhabditis elegans
Exon147919   172   IV: 12649004-12649175 Caenorhabditis elegans
Exon147921   110   IV: 12649228-12649337 Caenorhabditis elegans
Exon147923   457   IV: 12650196-12650652 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C26H9A.1b.1 12640462 12650652 1

1 Sequence

Length
3853

1 Sequence Ontology Term

Identifier Name Description
transcript