WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C26H9A.2b.1 Sequence Name  C26H9A.2b.1
Length (nt)  10511   Chromosome Location  IV: 12653422-12674763
Chromosome . Primary Identifier  IV Chromosome Location . Start  12653422
Chromosome Location . End  12674763 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C26H9A.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007752 wdfy-3 C26H9A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C26H9A.2b C26H9A.2b 10071   IV: 12653489-12653617

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C26H9A.2b.1 12653422 12674763 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

36 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147927   196   IV: 12653422-12653617 Caenorhabditis elegans
Exon147930   218   IV: 12653675-12653892 Caenorhabditis elegans
Exon147935   219   IV: 12654495-12654713 Caenorhabditis elegans
Exon147939   133   IV: 12654762-12654894 Caenorhabditis elegans
Exon147943   147   IV: 12655554-12655700 Caenorhabditis elegans
Exon147947   83   IV: 12655751-12655833 Caenorhabditis elegans
Exon147951   202   IV: 12655881-12656082 Caenorhabditis elegans
Exon147955   218   IV: 12656139-12656356 Caenorhabditis elegans
Exon147959   106   IV: 12656878-12656983 Caenorhabditis elegans
Exon147963   250   IV: 12657032-12657281 Caenorhabditis elegans
Exon147967   95   IV: 12657903-12657997 Caenorhabditis elegans
Exon147971   57   IV: 12658052-12658108 Caenorhabditis elegans
Exon147975   246   IV: 12658162-12658407 Caenorhabditis elegans
Exon147979   620   IV: 12658540-12659159 Caenorhabditis elegans
Exon147983   266   IV: 12659597-12659862 Caenorhabditis elegans
Exon147987   287   IV: 12660235-12660521 Caenorhabditis elegans
Exon147991   93   IV: 12660807-12660899 Caenorhabditis elegans
Exon147995   155   IV: 12661163-12661317 Caenorhabditis elegans
Exon147999   136   IV: 12661609-12661744 Caenorhabditis elegans
Exon148003   99   IV: 12661789-12661887 Caenorhabditis elegans
Exon148007   184   IV: 12661935-12662118 Caenorhabditis elegans
Exon148011   343   IV: 12662531-12662873 Caenorhabditis elegans
Exon148015   201   IV: 12662922-12663122 Caenorhabditis elegans
Exon148019   573   IV: 12663603-12664175 Caenorhabditis elegans
Exon148023   389   IV: 12664458-12664846 Caenorhabditis elegans
Exon148027   113   IV: 12665137-12665249 Caenorhabditis elegans
Exon148031   507   IV: 12665296-12665802 Caenorhabditis elegans
Exon148034   904   IV: 12666487-12667390 Caenorhabditis elegans
Exon148041   556   IV: 12667994-12668549 Caenorhabditis elegans
Exon148043   99   IV: 12668604-12668702 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C26H9A.2b.1 12653422 12674763 1

1 Sequence

Length
10511

1 Sequence Ontology Term

Identifier Name Description
transcript