WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C26H9A.2a.1 Sequence Name  C26H9A.2a.1
Length (nt)  10530   Chromosome Location  IV: 12653403-12674769
Chromosome . Primary Identifier  IV Chromosome Location . Start  12653403
Chromosome Location . End  12674769 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C26H9A.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007752 wdfy-3 C26H9A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C26H9A.2a C26H9A.2a 10065   IV: 12653489-12653617

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C26H9A.2a.1 12653403 12674769 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

36 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147946   215   IV: 12653403-12653617 Caenorhabditis elegans
Exon147950   218   IV: 12653675-12653892 Caenorhabditis elegans
Exon147955   219   IV: 12654495-12654713 Caenorhabditis elegans
Exon147959   133   IV: 12654762-12654894 Caenorhabditis elegans
Exon147963   147   IV: 12655554-12655700 Caenorhabditis elegans
Exon147967   83   IV: 12655751-12655833 Caenorhabditis elegans
Exon147971   202   IV: 12655881-12656082 Caenorhabditis elegans
Exon147975   218   IV: 12656139-12656356 Caenorhabditis elegans
Exon147979   106   IV: 12656878-12656983 Caenorhabditis elegans
Exon147983   250   IV: 12657032-12657281 Caenorhabditis elegans
Exon147987   95   IV: 12657903-12657997 Caenorhabditis elegans
Exon147991   57   IV: 12658052-12658108 Caenorhabditis elegans
Exon147995   246   IV: 12658162-12658407 Caenorhabditis elegans
Exon147999   620   IV: 12658540-12659159 Caenorhabditis elegans
Exon148003   266   IV: 12659597-12659862 Caenorhabditis elegans
Exon148007   287   IV: 12660235-12660521 Caenorhabditis elegans
Exon148011   93   IV: 12660807-12660899 Caenorhabditis elegans
Exon148015   155   IV: 12661163-12661317 Caenorhabditis elegans
Exon148019   136   IV: 12661609-12661744 Caenorhabditis elegans
Exon148023   99   IV: 12661789-12661887 Caenorhabditis elegans
Exon148027   184   IV: 12661935-12662118 Caenorhabditis elegans
Exon148031   343   IV: 12662531-12662873 Caenorhabditis elegans
Exon148035   201   IV: 12662922-12663122 Caenorhabditis elegans
Exon148039   573   IV: 12663603-12664175 Caenorhabditis elegans
Exon148043   389   IV: 12664458-12664846 Caenorhabditis elegans
Exon148047   113   IV: 12665137-12665249 Caenorhabditis elegans
Exon148051   507   IV: 12665296-12665802 Caenorhabditis elegans
Exon148057   898   IV: 12666493-12667390 Caenorhabditis elegans
Exon148061   556   IV: 12667994-12668549 Caenorhabditis elegans
Exon148063   99   IV: 12668604-12668702 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C26H9A.2a.1 12653403 12674769 1

1 Sequence

Length
10530

1 Sequence Ontology Term

Identifier Name Description
transcript