WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C26H9A.2b.1 Sequence Name  C26H9A.2b.1
Length (nt)  10511   Chromosome Location  IV: 12653422-12674763
Chromosome . Primary Identifier  IV Chromosome Location . Start  12653422
Chromosome Location . End  12674763 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C26H9A.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007752 wdfy-3 C26H9A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C26H9A.2b C26H9A.2b 10071   IV: 12653489-12653617

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C26H9A.2b.1 12653422 12674763 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

36 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147948   196   IV: 12653422-12653617 Caenorhabditis elegans
Exon147951   218   IV: 12653675-12653892 Caenorhabditis elegans
Exon147956   219   IV: 12654495-12654713 Caenorhabditis elegans
Exon147960   133   IV: 12654762-12654894 Caenorhabditis elegans
Exon147964   147   IV: 12655554-12655700 Caenorhabditis elegans
Exon147968   83   IV: 12655751-12655833 Caenorhabditis elegans
Exon147972   202   IV: 12655881-12656082 Caenorhabditis elegans
Exon147976   218   IV: 12656139-12656356 Caenorhabditis elegans
Exon147980   106   IV: 12656878-12656983 Caenorhabditis elegans
Exon147984   250   IV: 12657032-12657281 Caenorhabditis elegans
Exon147988   95   IV: 12657903-12657997 Caenorhabditis elegans
Exon147992   57   IV: 12658052-12658108 Caenorhabditis elegans
Exon147996   246   IV: 12658162-12658407 Caenorhabditis elegans
Exon148000   620   IV: 12658540-12659159 Caenorhabditis elegans
Exon148004   266   IV: 12659597-12659862 Caenorhabditis elegans
Exon148008   287   IV: 12660235-12660521 Caenorhabditis elegans
Exon148012   93   IV: 12660807-12660899 Caenorhabditis elegans
Exon148016   155   IV: 12661163-12661317 Caenorhabditis elegans
Exon148020   136   IV: 12661609-12661744 Caenorhabditis elegans
Exon148024   99   IV: 12661789-12661887 Caenorhabditis elegans
Exon148028   184   IV: 12661935-12662118 Caenorhabditis elegans
Exon148032   343   IV: 12662531-12662873 Caenorhabditis elegans
Exon148036   201   IV: 12662922-12663122 Caenorhabditis elegans
Exon148040   573   IV: 12663603-12664175 Caenorhabditis elegans
Exon148044   389   IV: 12664458-12664846 Caenorhabditis elegans
Exon148048   113   IV: 12665137-12665249 Caenorhabditis elegans
Exon148052   507   IV: 12665296-12665802 Caenorhabditis elegans
Exon148055   904   IV: 12666487-12667390 Caenorhabditis elegans
Exon148062   556   IV: 12667994-12668549 Caenorhabditis elegans
Exon148064   99   IV: 12668604-12668702 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C26H9A.2b.1 12653422 12674763 1

1 Sequence

Length
10511

1 Sequence Ontology Term

Identifier Name Description
transcript