WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C26H9A.2d.1 Sequence Name  C26H9A.2d.1
Length (nt)  10071   Chromosome Location  IV: 12653489-12674390
Chromosome . Primary Identifier  IV Chromosome Location . Start  12653489
Chromosome Location . End  12674390 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C26H9A.2d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007752 wdfy-3 C26H9A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C26H9A.2d C26H9A.2d 10071   IV: 12653489-12653617

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C26H9A.2d.1 12653489 12674390 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

36 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147928   129   IV: 12653489-12653617 Caenorhabditis elegans
Exon147932   218   IV: 12653675-12653892 Caenorhabditis elegans
Exon147937   219   IV: 12654495-12654713 Caenorhabditis elegans
Exon147941   133   IV: 12654762-12654894 Caenorhabditis elegans
Exon147945   147   IV: 12655554-12655700 Caenorhabditis elegans
Exon147949   83   IV: 12655751-12655833 Caenorhabditis elegans
Exon147953   202   IV: 12655881-12656082 Caenorhabditis elegans
Exon147957   218   IV: 12656139-12656356 Caenorhabditis elegans
Exon147961   106   IV: 12656878-12656983 Caenorhabditis elegans
Exon147965   250   IV: 12657032-12657281 Caenorhabditis elegans
Exon147969   95   IV: 12657903-12657997 Caenorhabditis elegans
Exon147973   57   IV: 12658052-12658108 Caenorhabditis elegans
Exon147977   246   IV: 12658162-12658407 Caenorhabditis elegans
Exon147981   620   IV: 12658540-12659159 Caenorhabditis elegans
Exon147985   266   IV: 12659597-12659862 Caenorhabditis elegans
Exon147989   287   IV: 12660235-12660521 Caenorhabditis elegans
Exon147993   93   IV: 12660807-12660899 Caenorhabditis elegans
Exon147997   155   IV: 12661163-12661317 Caenorhabditis elegans
Exon148001   136   IV: 12661609-12661744 Caenorhabditis elegans
Exon148005   99   IV: 12661789-12661887 Caenorhabditis elegans
Exon148009   184   IV: 12661935-12662118 Caenorhabditis elegans
Exon148013   343   IV: 12662531-12662873 Caenorhabditis elegans
Exon148017   201   IV: 12662922-12663122 Caenorhabditis elegans
Exon148021   573   IV: 12663603-12664175 Caenorhabditis elegans
Exon148025   389   IV: 12664458-12664846 Caenorhabditis elegans
Exon148029   113   IV: 12665137-12665249 Caenorhabditis elegans
Exon148033   507   IV: 12665296-12665802 Caenorhabditis elegans
Exon148037   898   IV: 12666493-12667390 Caenorhabditis elegans
Exon148039   562   IV: 12667988-12668549 Caenorhabditis elegans
Exon148045   99   IV: 12668604-12668702 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C26H9A.2d.1 12653489 12674390 1

1 Sequence

Length
10071

1 Sequence Ontology Term

Identifier Name Description
transcript