WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C26H9A.2a.1 Sequence Name  C26H9A.2a.1
Length (nt)  10530   Chromosome Location  IV: 12653403-12674769
Chromosome . Primary Identifier  IV Chromosome Location . Start  12653403
Chromosome Location . End  12674769 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C26H9A.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007752 wdfy-3 C26H9A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C26H9A.2a C26H9A.2a 10065   IV: 12653489-12653617

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C26H9A.2a.1 12653403 12674769 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

36 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147980   215   IV: 12653403-12653617 Caenorhabditis elegans
Exon147984   218   IV: 12653675-12653892 Caenorhabditis elegans
Exon147989   219   IV: 12654495-12654713 Caenorhabditis elegans
Exon147993   133   IV: 12654762-12654894 Caenorhabditis elegans
Exon147997   147   IV: 12655554-12655700 Caenorhabditis elegans
Exon148001   83   IV: 12655751-12655833 Caenorhabditis elegans
Exon148005   202   IV: 12655881-12656082 Caenorhabditis elegans
Exon148009   218   IV: 12656139-12656356 Caenorhabditis elegans
Exon148013   106   IV: 12656878-12656983 Caenorhabditis elegans
Exon148017   250   IV: 12657032-12657281 Caenorhabditis elegans
Exon148021   95   IV: 12657903-12657997 Caenorhabditis elegans
Exon148025   57   IV: 12658052-12658108 Caenorhabditis elegans
Exon148029   246   IV: 12658162-12658407 Caenorhabditis elegans
Exon148033   620   IV: 12658540-12659159 Caenorhabditis elegans
Exon148037   266   IV: 12659597-12659862 Caenorhabditis elegans
Exon148041   287   IV: 12660235-12660521 Caenorhabditis elegans
Exon148045   93   IV: 12660807-12660899 Caenorhabditis elegans
Exon148049   155   IV: 12661163-12661317 Caenorhabditis elegans
Exon148053   136   IV: 12661609-12661744 Caenorhabditis elegans
Exon148057   99   IV: 12661789-12661887 Caenorhabditis elegans
Exon148061   184   IV: 12661935-12662118 Caenorhabditis elegans
Exon148065   343   IV: 12662531-12662873 Caenorhabditis elegans
Exon148069   201   IV: 12662922-12663122 Caenorhabditis elegans
Exon148073   573   IV: 12663603-12664175 Caenorhabditis elegans
Exon148077   389   IV: 12664458-12664846 Caenorhabditis elegans
Exon148081   113   IV: 12665137-12665249 Caenorhabditis elegans
Exon148085   507   IV: 12665296-12665802 Caenorhabditis elegans
Exon148091   898   IV: 12666493-12667390 Caenorhabditis elegans
Exon148095   556   IV: 12667994-12668549 Caenorhabditis elegans
Exon148097   99   IV: 12668604-12668702 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C26H9A.2a.1 12653403 12674769 1

1 Sequence

Length
10530

1 Sequence Ontology Term

Identifier Name Description
transcript