WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C26H9A.2b.1 Sequence Name  C26H9A.2b.1
Length (nt)  10511   Chromosome Location  IV: 12653422-12674763
Chromosome . Primary Identifier  IV Chromosome Location . Start  12653422
Chromosome Location . End  12674763 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C26H9A.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007752 wdfy-3 C26H9A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C26H9A.2b C26H9A.2b 10071   IV: 12653489-12653617

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C26H9A.2b.1 12653422 12674763 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

36 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147982   196   IV: 12653422-12653617 Caenorhabditis elegans
Exon147985   218   IV: 12653675-12653892 Caenorhabditis elegans
Exon147990   219   IV: 12654495-12654713 Caenorhabditis elegans
Exon147994   133   IV: 12654762-12654894 Caenorhabditis elegans
Exon147998   147   IV: 12655554-12655700 Caenorhabditis elegans
Exon148002   83   IV: 12655751-12655833 Caenorhabditis elegans
Exon148006   202   IV: 12655881-12656082 Caenorhabditis elegans
Exon148010   218   IV: 12656139-12656356 Caenorhabditis elegans
Exon148014   106   IV: 12656878-12656983 Caenorhabditis elegans
Exon148018   250   IV: 12657032-12657281 Caenorhabditis elegans
Exon148022   95   IV: 12657903-12657997 Caenorhabditis elegans
Exon148026   57   IV: 12658052-12658108 Caenorhabditis elegans
Exon148030   246   IV: 12658162-12658407 Caenorhabditis elegans
Exon148034   620   IV: 12658540-12659159 Caenorhabditis elegans
Exon148038   266   IV: 12659597-12659862 Caenorhabditis elegans
Exon148042   287   IV: 12660235-12660521 Caenorhabditis elegans
Exon148046   93   IV: 12660807-12660899 Caenorhabditis elegans
Exon148050   155   IV: 12661163-12661317 Caenorhabditis elegans
Exon148054   136   IV: 12661609-12661744 Caenorhabditis elegans
Exon148058   99   IV: 12661789-12661887 Caenorhabditis elegans
Exon148062   184   IV: 12661935-12662118 Caenorhabditis elegans
Exon148066   343   IV: 12662531-12662873 Caenorhabditis elegans
Exon148070   201   IV: 12662922-12663122 Caenorhabditis elegans
Exon148074   573   IV: 12663603-12664175 Caenorhabditis elegans
Exon148078   389   IV: 12664458-12664846 Caenorhabditis elegans
Exon148082   113   IV: 12665137-12665249 Caenorhabditis elegans
Exon148086   507   IV: 12665296-12665802 Caenorhabditis elegans
Exon148089   904   IV: 12666487-12667390 Caenorhabditis elegans
Exon148096   556   IV: 12667994-12668549 Caenorhabditis elegans
Exon148098   99   IV: 12668604-12668702 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C26H9A.2b.1 12653422 12674763 1

1 Sequence

Length
10511

1 Sequence Ontology Term

Identifier Name Description
transcript