WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T23B5.1a.1 Sequence Name  T23B5.1a.1
Length (nt)  2443   Chromosome Location  IV: 12677398-12684378
Chromosome . Primary Identifier  IV Chromosome Location . Start  12677398
Chromosome Location . End  12684378 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T23B5.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011939 prmt-9 T23B5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T23B5.1a T23B5.1a 2043   IV: 12677798-12677860

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T23B5.1a.1 12677398 12684378 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon148080   463   IV: 12677398-12677860 Caenorhabditis elegans
Exon148082   126   IV: 12677918-12678043 Caenorhabditis elegans
Exon148084   353   IV: 12678894-12679246 Caenorhabditis elegans
Exon148086   217   IV: 12679890-12680106 Caenorhabditis elegans
Exon148088   166   IV: 12680780-12680945 Caenorhabditis elegans
Exon148091   302   IV: 12681009-12681310 Caenorhabditis elegans
Exon148092   259   IV: 12682687-12682945 Caenorhabditis elegans
Exon148093   110   IV: 12683001-12683110 Caenorhabditis elegans
Exon148094   278   IV: 12683878-12684155 Caenorhabditis elegans
Exon148095   169   IV: 12684210-12684378 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T23B5.1a.1 12677398 12684378 -1

1 Sequence

Length
2443

1 Sequence Ontology Term

Identifier Name Description
transcript