WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T23B5.3a.1 Sequence Name  T23B5.3a.1
Length (nt)  2451   Chromosome Location  IV: 12691990-12703662
Chromosome . Primary Identifier  IV Chromosome Location . Start  12691990
Chromosome Location . End  12703662 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T23B5.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011940 T23B5.3 T23B5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T23B5.3a T23B5.3a 2451   IV: 12691990-12692037

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T23B5.3a.1 12691990 12703662 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon148100   48   IV: 12691990-12692037 Caenorhabditis elegans
Exon148101   270   IV: 12692223-12692492 Caenorhabditis elegans
Exon148103   79   IV: 12692542-12692620 Caenorhabditis elegans
Exon148105   261   IV: 12693117-12693377 Caenorhabditis elegans
Exon148107   218   IV: 12693487-12693704 Caenorhabditis elegans
Exon148109   339   IV: 12694130-12694468 Caenorhabditis elegans
Exon148111   101   IV: 12694552-12694652 Caenorhabditis elegans
Exon148114   238   IV: 12696864-12697101 Caenorhabditis elegans
Exon148117   93   IV: 12697581-12697673 Caenorhabditis elegans
Exon148120   197   IV: 12702217-12702413 Caenorhabditis elegans
Exon148124   94   IV: 12702461-12702554 Caenorhabditis elegans
Exon148128   312   IV: 12702612-12702923 Caenorhabditis elegans
Exon148132   201   IV: 12703462-12703662 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T23B5.3a.1 12691990 12703662 1

1 Sequence

Length
2451

1 Sequence Ontology Term

Identifier Name Description
transcript