WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27D8.3b.1 Sequence Name  C27D8.3b.1
Length (nt)  2965   Chromosome Location  IV: 12706714-12711744
Chromosome . Primary Identifier  IV Chromosome Location . Start  12706714
Chromosome Location . End  12711744 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27D8.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007779 C27D8.3 C27D8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27D8.3b C27D8.3b 2751   IV: 12706917-12707165

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27D8.3b.1 12706714 12711744 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon148143   452   IV: 12706714-12707165 Caenorhabditis elegans
Exon148145   334   IV: 12707400-12707733 Caenorhabditis elegans
Exon148147   149   IV: 12707853-12708001 Caenorhabditis elegans
Exon148149   539   IV: 12708055-12708593 Caenorhabditis elegans
Exon148151   256   IV: 12708822-12709077 Caenorhabditis elegans
Exon148153   330   IV: 12709195-12709524 Caenorhabditis elegans
Exon148155   387   IV: 12709715-12710101 Caenorhabditis elegans
Exon148157   323   IV: 12710341-12710663 Caenorhabditis elegans
Exon148159   112   IV: 12711308-12711419 Caenorhabditis elegans
Exon148160   83   IV: 12711662-12711744 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27D8.3b.1 12706714 12711744 -1

1 Sequence

Length
2965

1 Sequence Ontology Term

Identifier Name Description
transcript