WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C36H8.1.1 Sequence Name  C36H8.1.1
Length (nt)  1389   Chromosome Location  IV: 12743037-12744813
Chromosome . Primary Identifier  IV Chromosome Location . Start  12743037
Chromosome Location . End  12744813 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C36H8.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007987 C36H8.1 C36H8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C36H8.1 C36H8.1 1257   IV: 12743094-12743485

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C36H8.1.1 12743037 12744813 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon148213   449   IV: 12743037-12743485 Caenorhabditis elegans
Exon148214   418   IV: 12743639-12744056 Caenorhabditis elegans
Exon148215   258   IV: 12744189-12744446 Caenorhabditis elegans
Exon148216   264   IV: 12744550-12744813 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C36H8.1.1 12743037 12744813 -1

1 Sequence

Length
1389

1 Sequence Ontology Term

Identifier Name Description
transcript