WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T23F6.5.1 Sequence Name  T23F6.5.1
Length (nt)  1965   Chromosome Location  IV: 12735172-12741538
Chromosome . Primary Identifier  IV Chromosome Location . Start  12735172
Chromosome Location . End  12741538 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T23F6.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011952 T23F6.5 T23F6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T23F6.5 T23F6.5 1803   IV: 12735319-12735405

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T23F6.5.1 12735172 12741538 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon148252   234   IV: 12735172-12735405 Caenorhabditis elegans
Exon148253   224   IV: 12735452-12735675 Caenorhabditis elegans
Exon148254   253   IV: 12736043-12736295 Caenorhabditis elegans
Exon148255   172   IV: 12736349-12736520 Caenorhabditis elegans
Exon148256   118   IV: 12736664-12736781 Caenorhabditis elegans
Exon148257   106   IV: 12737017-12737122 Caenorhabditis elegans
Exon148258   117   IV: 12737173-12737289 Caenorhabditis elegans
Exon148259   88   IV: 12737337-12737424 Caenorhabditis elegans
Exon148260   145   IV: 12737695-12737839 Caenorhabditis elegans
Exon148261   115   IV: 12737889-12738003 Caenorhabditis elegans
Exon148262   173   IV: 12738049-12738221 Caenorhabditis elegans
Exon148263   114   IV: 12738275-12738388 Caenorhabditis elegans
Exon148267   106   IV: 12741433-12741538 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T23F6.5.1 12735172 12741538 -1

1 Sequence

Length
1965

1 Sequence Ontology Term

Identifier Name Description
transcript