WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK897.1a.1 Sequence Name  ZK897.1a.1
Length (nt)  4235   Chromosome Location  IV: 12773867-12787035
Chromosome . Primary Identifier  IV Chromosome Location . Start  12773867
Chromosome Location . End  12787035 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK897.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006767 unc-31 ZK897.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK897.1a ZK897.1a 4062   IV: 12773886-12773945

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK897.1a.1 12773867 12787035 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon148291   79   IV: 12773867-12773945 Caenorhabditis elegans
Exon148304   174   IV: 12774262-12774435 Caenorhabditis elegans
Exon148318   36   IV: 12775092-12775127 Caenorhabditis elegans
Exon148325   158   IV: 12776126-12776283 Caenorhabditis elegans
Exon148339   450   IV: 12776403-12776852 Caenorhabditis elegans
Exon148353   214   IV: 12777463-12777676 Caenorhabditis elegans
Exon148367   155   IV: 12777800-12777954 Caenorhabditis elegans
Exon148385   36   IV: 12779434-12779469 Caenorhabditis elegans
Exon148395   103   IV: 12780869-12780971 Caenorhabditis elegans
Exon148412   231   IV: 12781315-12781545 Caenorhabditis elegans
Exon148429   319   IV: 12781647-12781965 Caenorhabditis elegans
Exon148448   320   IV: 12782438-12782757 Caenorhabditis elegans
Exon148465   499   IV: 12782802-12783300 Caenorhabditis elegans
Exon148482   107   IV: 12783720-12783826 Caenorhabditis elegans
Exon148506   157   IV: 12784685-12784841 Caenorhabditis elegans
Exon148523   142   IV: 12784919-12785060 Caenorhabditis elegans
Exon148540   156   IV: 12785111-12785266 Caenorhabditis elegans
Exon148557   376   IV: 12785675-12786050 Caenorhabditis elegans
Exon148576   134   IV: 12786299-12786432 Caenorhabditis elegans
Exon148609   389   IV: 12786647-12787035 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK897.1a.1 12773867 12787035 1

1 Sequence

Length
4235

1 Sequence Ontology Term

Identifier Name Description
transcript