WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK897.1c.1 Sequence Name  ZK897.1c.1
Length (nt)  4978   Chromosome Location  IV: 12773886-12788354
Chromosome . Primary Identifier  IV Chromosome Location . Start  12773886
Chromosome Location . End  12788354 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK897.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006767 unc-31 ZK897.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK897.1c ZK897.1c 4137   IV: 12773886-12773945

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK897.1c.1 12773886 12788354 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon148248   60   IV: 12773886-12773945 Caenorhabditis elegans
Exon148251   174   IV: 12774262-12774435 Caenorhabditis elegans
Exon148272   158   IV: 12776126-12776283 Caenorhabditis elegans
Exon148286   450   IV: 12776403-12776852 Caenorhabditis elegans
Exon148300   214   IV: 12777463-12777676 Caenorhabditis elegans
Exon148314   155   IV: 12777800-12777954 Caenorhabditis elegans
Exon148332   36   IV: 12779434-12779469 Caenorhabditis elegans
Exon148342   103   IV: 12780869-12780971 Caenorhabditis elegans
Exon148359   231   IV: 12781315-12781545 Caenorhabditis elegans
Exon148376   319   IV: 12781647-12781965 Caenorhabditis elegans
Exon148395   320   IV: 12782438-12782757 Caenorhabditis elegans
Exon148412   499   IV: 12782802-12783300 Caenorhabditis elegans
Exon148429   107   IV: 12783720-12783826 Caenorhabditis elegans
Exon148453   157   IV: 12784685-12784841 Caenorhabditis elegans
Exon148470   142   IV: 12784919-12785060 Caenorhabditis elegans
Exon148487   156   IV: 12785111-12785266 Caenorhabditis elegans
Exon148504   376   IV: 12785675-12786050 Caenorhabditis elegans
Exon148523   134   IV: 12786299-12786432 Caenorhabditis elegans
Exon148538   218   IV: 12786647-12786864 Caenorhabditis elegans
Exon148571   969   IV: 12787386-12788354 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK897.1c.1 12773886 12788354 1

1 Sequence

Length
4978

1 Sequence Ontology Term

Identifier Name Description
transcript