WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK897.1r.1 Sequence Name  ZK897.1r.1
Length (nt)  4113   Chromosome Location  IV: 12773886-12787513
Chromosome . Primary Identifier  IV Chromosome Location . Start  12773886
Chromosome Location . End  12787513 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK897.1r.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006767 unc-31 ZK897.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK897.1r ZK897.1r 4113   IV: 12773886-12773945

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK897.1r.1 12773886 12787513 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon148268   60   IV: 12773886-12773945 Caenorhabditis elegans
Exon148283   174   IV: 12774262-12774435 Caenorhabditis elegans
Exon148304   158   IV: 12776126-12776283 Caenorhabditis elegans
Exon148318   450   IV: 12776403-12776852 Caenorhabditis elegans
Exon148332   214   IV: 12777463-12777676 Caenorhabditis elegans
Exon148346   155   IV: 12777800-12777954 Caenorhabditis elegans
Exon148374   103   IV: 12780869-12780971 Caenorhabditis elegans
Exon148393   231   IV: 12781315-12781545 Caenorhabditis elegans
Exon148410   319   IV: 12781647-12781965 Caenorhabditis elegans
Exon148429   320   IV: 12782438-12782757 Caenorhabditis elegans
Exon148446   499   IV: 12782802-12783300 Caenorhabditis elegans
Exon148463   107   IV: 12783720-12783826 Caenorhabditis elegans
Exon148470   12   IV: 12784063-12784074 Caenorhabditis elegans
Exon148487   157   IV: 12784685-12784841 Caenorhabditis elegans
Exon148504   142   IV: 12784919-12785060 Caenorhabditis elegans
Exon148521   156   IV: 12785111-12785266 Caenorhabditis elegans
Exon148538   376   IV: 12785675-12786050 Caenorhabditis elegans
Exon148557   134   IV: 12786299-12786432 Caenorhabditis elegans
Exon148571   218   IV: 12786647-12786864 Caenorhabditis elegans
Exon148590   128   IV: 12787386-12787513 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK897.1r.1 12773886 12787513 1

1 Sequence

Length
4113

1 Sequence Ontology Term

Identifier Name Description
transcript