WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK897.1e.1 Sequence Name  ZK897.1e.1
Length (nt)  2793   Chromosome Location  IV: 12780966-12787513
Chromosome . Primary Identifier  IV Chromosome Location . Start  12780966
Chromosome Location . End  12787513 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK897.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006767 unc-31 ZK897.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK897.1e ZK897.1e 2793   IV: 12780966-12780971

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK897.1e.1 12780966 12787513 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon148355   6   IV: 12780966-12780971 Caenorhabditis elegans
Exon148361   231   IV: 12781315-12781545 Caenorhabditis elegans
Exon148378   319   IV: 12781647-12781965 Caenorhabditis elegans
Exon148397   320   IV: 12782438-12782757 Caenorhabditis elegans
Exon148414   499   IV: 12782802-12783300 Caenorhabditis elegans
Exon148431   107   IV: 12783720-12783826 Caenorhabditis elegans
Exon148455   157   IV: 12784685-12784841 Caenorhabditis elegans
Exon148472   142   IV: 12784919-12785060 Caenorhabditis elegans
Exon148489   156   IV: 12785111-12785266 Caenorhabditis elegans
Exon148506   376   IV: 12785675-12786050 Caenorhabditis elegans
Exon148525   134   IV: 12786299-12786432 Caenorhabditis elegans
Exon148539   218   IV: 12786647-12786864 Caenorhabditis elegans
Exon148557   128   IV: 12787386-12787513 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK897.1e.1 12780966 12787513 1

1 Sequence

Length
2793

1 Sequence Ontology Term

Identifier Name Description
transcript