WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F07C6.4f.1 Sequence Name  F07C6.4f.1
Length (nt)  3273   Chromosome Location  IV: 12805925-12830114
Chromosome . Primary Identifier  IV Chromosome Location . Start  12805925
Chromosome Location . End  12830114 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F07C6.4f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008555 F07C6.4 F07C6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F07C6.4f F07C6.4f 2721   IV: 12805972-12806052

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F07C6.4f.1 12805925 12830114 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon148597   128   IV: 12805925-12806052 Caenorhabditis elegans
Exon148605   113   IV: 12806101-12806213 Caenorhabditis elegans
Exon148610   99   IV: 12806260-12806358 Caenorhabditis elegans
Exon148615   85   IV: 12806419-12806503 Caenorhabditis elegans
Exon148620   77   IV: 12807687-12807763 Caenorhabditis elegans
Exon148625   153   IV: 12808939-12809091 Caenorhabditis elegans
Exon148633   231   IV: 12810086-12810316 Caenorhabditis elegans
Exon148640   87   IV: 12811432-12811518 Caenorhabditis elegans
Exon148646   151   IV: 12812667-12812817 Caenorhabditis elegans
Exon148655   110   IV: 12823033-12823142 Caenorhabditis elegans
Exon148664   158   IV: 12823357-12823514 Caenorhabditis elegans
Exon148672   254   IV: 12823568-12823821 Caenorhabditis elegans
Exon148685   229   IV: 12825401-12825629 Caenorhabditis elegans
Exon148693   169   IV: 12825687-12825855 Caenorhabditis elegans
Exon148706   73   IV: 12827548-12827620 Caenorhabditis elegans
Exon148713   383   IV: 12828144-12828526 Caenorhabditis elegans
Exon148721   773   IV: 12829342-12830114 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F07C6.4f.1 12805925 12830114 1

1 Sequence

Length
3273

1 Sequence Ontology Term

Identifier Name Description
transcript