WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F07C6.4e.1 Sequence Name  F07C6.4e.1
Length (nt)  2777   Chromosome Location  IV: 12805927-12827284
Chromosome . Primary Identifier  IV Chromosome Location . Start  12805927
Chromosome Location . End  12827284 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F07C6.4e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008555 F07C6.4 F07C6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F07C6.4e F07C6.4e 2307   IV: 12805972-12806052

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F07C6.4e.1 12805927 12827284 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon148598   126   IV: 12805927-12806052 Caenorhabditis elegans
Exon148604   113   IV: 12806101-12806213 Caenorhabditis elegans
Exon148609   99   IV: 12806260-12806358 Caenorhabditis elegans
Exon148614   85   IV: 12806419-12806503 Caenorhabditis elegans
Exon148619   77   IV: 12807687-12807763 Caenorhabditis elegans
Exon148624   153   IV: 12808939-12809091 Caenorhabditis elegans
Exon148632   231   IV: 12810086-12810316 Caenorhabditis elegans
Exon148639   87   IV: 12811432-12811518 Caenorhabditis elegans
Exon148645   151   IV: 12812667-12812817 Caenorhabditis elegans
Exon148654   110   IV: 12823033-12823142 Caenorhabditis elegans
Exon148663   158   IV: 12823357-12823514 Caenorhabditis elegans
Exon148671   254   IV: 12823568-12823821 Caenorhabditis elegans
Exon148684   229   IV: 12825401-12825629 Caenorhabditis elegans
Exon148692   169   IV: 12825687-12825855 Caenorhabditis elegans
Exon148701   735   IV: 12826550-12827284 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F07C6.4e.1 12805927 12827284 1

1 Sequence

Length
2777

1 Sequence Ontology Term

Identifier Name Description
transcript