WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F07C6.4g.1 Sequence Name  F07C6.4g.1
Length (nt)  2445   Chromosome Location  IV: 12808973-12829609
Chromosome . Primary Identifier  IV Chromosome Location . Start  12808973
Chromosome Location . End  12829609 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F07C6.4g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008555 F07C6.4 F07C6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F07C6.4g F07C6.4g 2445   IV: 12808973-12809091

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F07C6.4g.1 12808973 12829609 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon148626   119   IV: 12808973-12809091 Caenorhabditis elegans
Exon148634   231   IV: 12810086-12810316 Caenorhabditis elegans
Exon148641   87   IV: 12811432-12811518 Caenorhabditis elegans
Exon148647   151   IV: 12812667-12812817 Caenorhabditis elegans
Exon148656   110   IV: 12823033-12823142 Caenorhabditis elegans
Exon148665   158   IV: 12823357-12823514 Caenorhabditis elegans
Exon148673   254   IV: 12823568-12823821 Caenorhabditis elegans
Exon148686   229   IV: 12825401-12825629 Caenorhabditis elegans
Exon148694   169   IV: 12825687-12825855 Caenorhabditis elegans
Exon148700   213   IV: 12826550-12826762 Caenorhabditis elegans
Exon148707   73   IV: 12827548-12827620 Caenorhabditis elegans
Exon148714   383   IV: 12828144-12828526 Caenorhabditis elegans
Exon148717   268   IV: 12829342-12829609 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F07C6.4g.1 12808973 12829609 1

1 Sequence

Length
2445

1 Sequence Ontology Term

Identifier Name Description
transcript