WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F07C6.4d.1 Sequence Name  F07C6.4d.1
Length (nt)  2977   Chromosome Location  IV: 12805929-12829609
Chromosome . Primary Identifier  IV Chromosome Location . Start  12805929
Chromosome Location . End  12829609 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F07C6.4d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008555 F07C6.4 F07C6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F07C6.4d F07C6.4d 2934   IV: 12805972-12806052

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F07C6.4d.1 12805929 12829609 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon148654   124   IV: 12805929-12806052 Caenorhabditis elegans
Exon148658   113   IV: 12806101-12806213 Caenorhabditis elegans
Exon148663   99   IV: 12806260-12806358 Caenorhabditis elegans
Exon148668   85   IV: 12806419-12806503 Caenorhabditis elegans
Exon148673   77   IV: 12807687-12807763 Caenorhabditis elegans
Exon148678   153   IV: 12808939-12809091 Caenorhabditis elegans
Exon148686   231   IV: 12810086-12810316 Caenorhabditis elegans
Exon148693   87   IV: 12811432-12811518 Caenorhabditis elegans
Exon148699   151   IV: 12812667-12812817 Caenorhabditis elegans
Exon148708   110   IV: 12823033-12823142 Caenorhabditis elegans
Exon148717   158   IV: 12823357-12823514 Caenorhabditis elegans
Exon148725   254   IV: 12823568-12823821 Caenorhabditis elegans
Exon148738   229   IV: 12825401-12825629 Caenorhabditis elegans
Exon148746   169   IV: 12825687-12825855 Caenorhabditis elegans
Exon148754   213   IV: 12826550-12826762 Caenorhabditis elegans
Exon148760   73   IV: 12827548-12827620 Caenorhabditis elegans
Exon148767   383   IV: 12828144-12828526 Caenorhabditis elegans
Exon148771   268   IV: 12829342-12829609 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F07C6.4d.1 12805929 12829609 1

1 Sequence

Length
2977

1 Sequence Ontology Term

Identifier Name Description
transcript