WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F07C6.4g.1 Sequence Name  F07C6.4g.1
Length (nt)  2445   Chromosome Location  IV: 12808973-12829609
Chromosome . Primary Identifier  IV Chromosome Location . Start  12808973
Chromosome Location . End  12829609 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F07C6.4g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008555 F07C6.4 F07C6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F07C6.4g F07C6.4g 2445   IV: 12808973-12809091

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F07C6.4g.1 12808973 12829609 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon148681   119   IV: 12808973-12809091 Caenorhabditis elegans
Exon148689   231   IV: 12810086-12810316 Caenorhabditis elegans
Exon148696   87   IV: 12811432-12811518 Caenorhabditis elegans
Exon148702   151   IV: 12812667-12812817 Caenorhabditis elegans
Exon148711   110   IV: 12823033-12823142 Caenorhabditis elegans
Exon148720   158   IV: 12823357-12823514 Caenorhabditis elegans
Exon148728   254   IV: 12823568-12823821 Caenorhabditis elegans
Exon148741   229   IV: 12825401-12825629 Caenorhabditis elegans
Exon148749   169   IV: 12825687-12825855 Caenorhabditis elegans
Exon148755   213   IV: 12826550-12826762 Caenorhabditis elegans
Exon148762   73   IV: 12827548-12827620 Caenorhabditis elegans
Exon148769   383   IV: 12828144-12828526 Caenorhabditis elegans
Exon148772   268   IV: 12829342-12829609 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F07C6.4g.1 12808973 12829609 1

1 Sequence

Length
2445

1 Sequence Ontology Term

Identifier Name Description
transcript