WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F07C6.4h.1 Sequence Name  F07C6.4h.1
Length (nt)  2232   Chromosome Location  IV: 12808973-12829609
Chromosome . Primary Identifier  IV Chromosome Location . Start  12808973
Chromosome Location . End  12829609 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F07C6.4h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008555 F07C6.4 F07C6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F07C6.4h F07C6.4h 2232   IV: 12808973-12809091

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F07C6.4h.1 12808973 12829609 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon148682   119   IV: 12808973-12809091 Caenorhabditis elegans
Exon148690   231   IV: 12810086-12810316 Caenorhabditis elegans
Exon148697   87   IV: 12811432-12811518 Caenorhabditis elegans
Exon148703   151   IV: 12812667-12812817 Caenorhabditis elegans
Exon148712   110   IV: 12823033-12823142 Caenorhabditis elegans
Exon148721   158   IV: 12823357-12823514 Caenorhabditis elegans
Exon148729   254   IV: 12823568-12823821 Caenorhabditis elegans
Exon148742   229   IV: 12825401-12825629 Caenorhabditis elegans
Exon148750   169   IV: 12825687-12825855 Caenorhabditis elegans
Exon148763   73   IV: 12827548-12827620 Caenorhabditis elegans
Exon148770   383   IV: 12828144-12828526 Caenorhabditis elegans
Exon148773   268   IV: 12829342-12829609 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F07C6.4h.1 12808973 12829609 1

1 Sequence

Length
2232

1 Sequence Ontology Term

Identifier Name Description
transcript