WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M02B1.1b.1 Sequence Name  M02B1.1b.1
Length (nt)  987   Chromosome Location  IV: 12850675-12853814
Chromosome . Primary Identifier  IV Chromosome Location . Start  12850675
Chromosome Location . End  12853814 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M02B1.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005153 srf-3 M02B1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M02B1.1b M02B1.1b 987   IV: 12850675-12850736

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M02B1.1b.1 12850675 12853814 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon148742   62   IV: 12850675-12850736 Caenorhabditis elegans
Exon148744   120   IV: 12850784-12850903 Caenorhabditis elegans
Exon148746   139   IV: 12851561-12851699 Caenorhabditis elegans
Exon148749   80   IV: 12851779-12851858 Caenorhabditis elegans
Exon148752   335   IV: 12852308-12852642 Caenorhabditis elegans
Exon148754   251   IV: 12853564-12853814 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M02B1.1b.1 12850675 12853814 1

1 Sequence

Length
987

1 Sequence Ontology Term

Identifier Name Description
transcript