WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK896.9b.1 Sequence Name  ZK896.9b.1
Length (nt)  693   Chromosome Location  IV: 12857850-12859374
Chromosome . Primary Identifier  IV Chromosome Location . Start  12857850
Chromosome Location . End  12859374 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK896.9b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014139 nstp-5 ZK896.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK896.9b ZK896.9b 693   IV: 12857850-12858009

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK896.9b.1 12857850 12859374 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon148761   160   IV: 12857850-12858009 Caenorhabditis elegans
Exon148763   72   IV: 12858058-12858129 Caenorhabditis elegans
Exon148765   77   IV: 12858501-12858577 Caenorhabditis elegans
Exon148767   305   IV: 12858943-12859247 Caenorhabditis elegans
Exon148768   79   IV: 12859296-12859374 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK896.9b.1 12857850 12859374 1

1 Sequence

Length
693

1 Sequence Ontology Term

Identifier Name Description
transcript