WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK896.7.1 Sequence Name  ZK896.7.1
Length (nt)  1193   Chromosome Location  IV: 12866109-12869080
Chromosome . Primary Identifier  IV Chromosome Location . Start  12866109
Chromosome Location . End  12869080 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK896.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014138 clec-186 ZK896.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK896.7 ZK896.7 1062   IV: 12866158-12866255

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK896.7.1 12866109 12869080 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon148785   147   IV: 12866109-12866255 Caenorhabditis elegans
Exon148786   116   IV: 12866793-12866908 Caenorhabditis elegans
Exon148787   467   IV: 12867102-12867568 Caenorhabditis elegans
Exon148788   39   IV: 12867679-12867717 Caenorhabditis elegans
Exon148789   100   IV: 12867770-12867869 Caenorhabditis elegans
Exon148791   164   IV: 12868710-12868873 Caenorhabditis elegans
Exon148792   160   IV: 12868921-12869080 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK896.7.1 12866109 12869080 1

1 Sequence

Length
1193

1 Sequence Ontology Term

Identifier Name Description
transcript