WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK896.8.1 Sequence Name  ZK896.8.1
Length (nt)  3727   Chromosome Location  IV: 12860097-12865956
Chromosome . Primary Identifier  IV Chromosome Location . Start  12860097
Chromosome Location . End  12865956 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK896.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001543 gcy-18 ZK896.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK896.8 ZK896.8 3342   IV: 12860137-12860408

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK896.8.1 12860097 12865956 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon148825   312   IV: 12860097-12860408 Caenorhabditis elegans
Exon148826   110   IV: 12860489-12860598 Caenorhabditis elegans
Exon148827   81   IV: 12860650-12860730 Caenorhabditis elegans
Exon148828   101   IV: 12861469-12861569 Caenorhabditis elegans
Exon148829   175   IV: 12861854-12862028 Caenorhabditis elegans
Exon148830   293   IV: 12862075-12862367 Caenorhabditis elegans
Exon148831   148   IV: 12862408-12862555 Caenorhabditis elegans
Exon148832   209   IV: 12862814-12863022 Caenorhabditis elegans
Exon148833   89   IV: 12863069-12863157 Caenorhabditis elegans
Exon148834   90   IV: 12863208-12863297 Caenorhabditis elegans
Exon148835   421   IV: 12863539-12863959 Caenorhabditis elegans
Exon148836   202   IV: 12864113-12864314 Caenorhabditis elegans
Exon148837   186   IV: 12864361-12864546 Caenorhabditis elegans
Exon148838   172   IV: 12864598-12864769 Caenorhabditis elegans
Exon148839   1138   IV: 12864819-12865956 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK896.8.1 12860097 12865956 1

1 Sequence

Length
3727

1 Sequence Ontology Term

Identifier Name Description
transcript