WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK896.4.1 Sequence Name  ZK896.4.1
Length (nt)  1662   Chromosome Location  IV: 12880607-12883290
Chromosome . Primary Identifier  IV Chromosome Location . Start  12880607
Chromosome Location . End  12883290 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK896.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014135 ZK896.4 ZK896.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK896.4 ZK896.4 1458   IV: 12880667-12880716

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK896.4.1 12880607 12883290 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon148823   110   IV: 12880607-12880716 Caenorhabditis elegans
Exon148824   137   IV: 12880765-12880901 Caenorhabditis elegans
Exon148825   208   IV: 12880956-12881163 Caenorhabditis elegans
Exon148826   110   IV: 12881336-12881445 Caenorhabditis elegans
Exon148827   205   IV: 12881501-12881705 Caenorhabditis elegans
Exon148828   122   IV: 12881759-12881880 Caenorhabditis elegans
Exon148829   214   IV: 12881951-12882164 Caenorhabditis elegans
Exon148830   110   IV: 12882397-12882506 Caenorhabditis elegans
Exon148831   101   IV: 12882551-12882651 Caenorhabditis elegans
Exon148832   125   IV: 12882757-12882881 Caenorhabditis elegans
Exon148833   220   IV: 12883071-12883290 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK896.4.1 12880607 12883290 -1

1 Sequence

Length
1662

1 Sequence Ontology Term

Identifier Name Description
transcript