WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08D8.6a.1 Sequence Name  K08D8.6a.1
Length (nt)  1714   Chromosome Location  IV: 12887062-12890508
Chromosome . Primary Identifier  IV Chromosome Location . Start  12887062
Chromosome Location . End  12890508 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08D8.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010660 K08D8.6 K08D8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08D8.6a K08D8.6a 1476   IV: 12887292-12887341

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08D8.6a.1 12887062 12890508 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon148844   280   IV: 12887062-12887341 Caenorhabditis elegans
Exon148846   143   IV: 12887389-12887531 Caenorhabditis elegans
Exon148848   208   IV: 12887780-12887987 Caenorhabditis elegans
Exon148850   110   IV: 12888034-12888143 Caenorhabditis elegans
Exon148852   211   IV: 12888229-12888439 Caenorhabditis elegans
Exon148854   122   IV: 12888489-12888610 Caenorhabditis elegans
Exon148857   220   IV: 12888668-12888887 Caenorhabditis elegans
Exon148858   110   IV: 12889510-12889619 Caenorhabditis elegans
Exon148859   101   IV: 12889680-12889780 Caenorhabditis elegans
Exon148860   125   IV: 12889824-12889948 Caenorhabditis elegans
Exon148861   84   IV: 12890425-12890508 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08D8.6a.1 12887062 12890508 -1

1 Sequence

Length
1714

1 Sequence Ontology Term

Identifier Name Description
transcript