WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08D8.6b.1 Sequence Name  K08D8.6b.1
Length (nt)  912   Chromosome Location  IV: 12887292-12888735
Chromosome . Primary Identifier  IV Chromosome Location . Start  12887292
Chromosome Location . End  12888735 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08D8.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010660 K08D8.6 K08D8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08D8.6b K08D8.6b 912   IV: 12887292-12887341

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08D8.6b.1 12887292 12888735 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon148845   50   IV: 12887292-12887341 Caenorhabditis elegans
Exon148847   143   IV: 12887389-12887531 Caenorhabditis elegans
Exon148849   208   IV: 12887780-12887987 Caenorhabditis elegans
Exon148851   110   IV: 12888034-12888143 Caenorhabditis elegans
Exon148853   211   IV: 12888229-12888439 Caenorhabditis elegans
Exon148855   122   IV: 12888489-12888610 Caenorhabditis elegans
Exon148856   68   IV: 12888668-12888735 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08D8.6b.1 12887292 12888735 -1

1 Sequence

Length
912

1 Sequence Ontology Term

Identifier Name Description
transcript