WormMine: Gene WBGene00185093

• WormBase Gene ID: WBGene00185093
• Gene Name: K08D8.8
• Sequence Name: K08D8.8
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by dpy-21 and hlh-26 based on RNA-seq studies.
• Biotype: SO:0000336
• Genetic Position: :±
• Length (nt): 492

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00185093

Genomics

0 Transcripts

Other

0 CDSs

0 RNAi Result

18 Allele

• gk964278
• gk964078
• gk963546
• gk963547
• gk964500
• gk962765
• WBVar00091023
• gk503415
• gk617354
• gk809822
• WBVar02121033
• WBVar02123249
• gk215466
• WBVar01804141
• WBVar01570514
• WBVar01570515
• WBVar01570516
• cxTi7637

1 Chromosome

• WormBase ID: IV
• Organism: Caenorhabditis elegans
• Length (nt): 17493829

1 Chromosome Location

• Feature . Primary Identifier: WBGene00185093
• Start: 12901680
• End: 12902171
• Strand: 1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrIV_12902172..12903059
• Length (nt): 888
• Chromosome Location: IV: 12902172-12903059
• Organism: Caenorhabditis elegans

4 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly increased expression in dpy-21(e428) comparing to in N2 during L3 stage.	DESeq v1.6.3. Fold change > 1.5.	WBPaper00050370:dpy-21(e428)_L3_upregulated
Bacteria: B.thuringiensis	Transcripts in elt-2(RNAi) animals that were significantly differentially expressed at least for one time point on the non pathogenic strain Bt407 compared to E. coli OP50.	Cuffdiff	WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
Bacteria: B.thuringiensis	Transcripts in elt-2(RNAi) animals that were significantly differentially expressed at least for one time point and one pathogenic strain Bt247 and Bt679 compared to the non pathogenic strain Bt407.	Cuffdiff	WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
	Transcripts that showed significantly decreased expression in hlh-26(ok1453) animals exposed to E. faecium for 8 hours, comparing to N2 animals exposed to E. faecium for 8 hours.	Fold change > 2.	WBPaper00062585:hlh-26(ok1453)_downregulated_E.faecium

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00185093
• Start: 12901680
• End: 12902171
• Strand: 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 492

1 Sequence Ontology Term