WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08D8.4a.1 Sequence Name  K08D8.4a.1
Length (nt)  1741   Chromosome Location  IV: 12907469-12909998
Chromosome . Primary Identifier  IV Chromosome Location . Start  12907469
Chromosome Location . End  12909998 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08D8.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010658 K08D8.4 K08D8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08D8.4a K08D8.4a 1644   IV: 12907547-12907812

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08D8.4a.1 12907469 12909998 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon148900   344   IV: 12907469-12907812 Caenorhabditis elegans
Exon148904   128   IV: 12907857-12907984 Caenorhabditis elegans
Exon148910   214   IV: 12908223-12908436 Caenorhabditis elegans
Exon148915   107   IV: 12908479-12908585 Caenorhabditis elegans
Exon148918   62   IV: 12908634-12908695 Caenorhabditis elegans
Exon148923   155   IV: 12908744-12908898 Caenorhabditis elegans
Exon148928   315   IV: 12909176-12909490 Caenorhabditis elegans
Exon148934   113   IV: 12909534-12909646 Caenorhabditis elegans
Exon148945   303   IV: 12909696-12909998 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08D8.4a.1 12907469 12909998 -1

1 Sequence

Length
1741

1 Sequence Ontology Term

Identifier Name Description
transcript