WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08D8.5.1 Sequence Name  K08D8.5.1
Length (nt)  1068   Chromosome Location  IV: 12910647-12912129
Chromosome . Primary Identifier  IV Chromosome Location . Start  12910647
Chromosome Location . End  12912129 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08D8.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010659 K08D8.5 K08D8.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08D8.5 K08D8.5 1005   IV: 12910690-12910797

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08D8.5.1 12910647 12912129 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon148946   151   IV: 12910647-12910797 Caenorhabditis elegans
Exon148947   155   IV: 12910860-12911014 Caenorhabditis elegans
Exon148948   315   IV: 12911067-12911381 Caenorhabditis elegans
Exon148949   113   IV: 12911637-12911749 Caenorhabditis elegans
Exon148950   334   IV: 12911796-12912129 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08D8.5.1 12910647 12912129 -1

1 Sequence

Length
1068

1 Sequence Ontology Term

Identifier Name Description
transcript