WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:K08D8.4e Sequence Name  K08D8.4e
Length (nt)  1435   Chromosome Location  IV: 12907547-12909979
Chromosome . Primary Identifier  IV Chromosome Location . Start  12907547
Chromosome Location . End  12909979 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08D8.4e

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010658 K08D8.4 K08D8.4 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K08D8.4e 12907547 12909979 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon148957   164   IV: 12907547-12907710 Caenorhabditis elegans
Exon148962   128   IV: 12907857-12907984 Caenorhabditis elegans
Exon148968   214   IV: 12908223-12908436 Caenorhabditis elegans
Exon148976   62   IV: 12908634-12908695 Caenorhabditis elegans
Exon148981   155   IV: 12908744-12908898 Caenorhabditis elegans
Exon148987   315   IV: 12909176-12909490 Caenorhabditis elegans
Exon148993   113   IV: 12909534-12909646 Caenorhabditis elegans
Exon148997   284   IV: 12909696-12909979 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K08D8.4e 12907547 12909979 -1

1 Sequence

Length
1435

1 Sequence Ontology Term

Identifier Name Description
transcript